MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3551 · 33 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c amiD (requalified) — amidase amiD amiB2 (requalified) — amidase amiB2 amiC (requalified) — amidase amiC fas (requalified) — fatty acid synthase fas Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadB (requalified) — fatty oxidation protein FadB fadB accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC echA18 (requalified) — enoyl-CoA hydratase echA18 Rv1264 (requalified) — adenylate cyclase Rv1264 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c tsf (requalified) — translation elongation factor Ts tsf rpsB (requalified) — 30S ribosomal protein S2 rpsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.