MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3543c · 42 genes shown · anchor fadE28 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 ltp2 (requalified) — lipid-transfer protein ltp2 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 cyp125 (requalified) — steroid C26-monooxygenase cyp125 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 fadB (requalified) — fatty oxidation protein FadB fadB ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 Rv3521 (family_assigned) — hypothetical protein Rv3521 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 pks13 (requalified) — polyketide synthase Pks13 pks13 cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.