MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3539 · 35 genes shown · anchor kstD · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE63 (family_assigned) — PPE family protein PPE63 PPE63 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3538 (requalified) — dehydrogenase Rv3538 PE25 (family_assigned) — PE family protein PE25 PE25 PPE69 (family_assigned) — PPE family protein PPE69 PPE69 PE36 (family_assigned) — PE family protein PE36 PE36 lipY (requalified) — triacylglycerol lipase Lip lipY kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv1817 (family_assigned) — FAD-binding protein Rv1817 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 PPE41 (family_assigned) — PPE family protein PPE41 PPE41 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv2432c (dark) — hypothetical protein Rv2432c nrtS (requalified) — nitrate/nitrite transporter NrtS nrtS Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c esxD (family_assigned) — WXG100 family type VII secretion target esxD esxC (family_assigned) — WXG100 family type VII secretion target esxC eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 lppB (family_assigned) — LppA family lipoprotein lppB eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv3896c (requalified) — transglycosylase Rv3896c tgs4 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs4 Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.