MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3538 · 46 genes shown · anchor kstD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3538 (requalified) — dehydrogenase Rv3538 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 hsaF (requalified) — 4-hydroxy-2-oxovalerate aldolase hsaF Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG hsaE (requalified) — 2-keto-4-pentenoate hydratase hsaE ltp2 (requalified) — lipid-transfer protein ltp2 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv1817 (family_assigned) — FAD-binding protein Rv1817 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 fas (requalified) — fatty acid synthase fas fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE leuB (requalified) — 3-isopropylmalate dehydrogenase leuB chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fadB (requalified) — fatty oxidation protein FadB fadB ltp3 (family_assigned) — thiolase domain-containing protein ltp3 leuA (requalified) — 2-isopropylmalate synthase leuA fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 aldA (requalified) — aldehyde dehydrogenase aldA hsaD (requalified) — alpha/beta fold hydrolase hsaD chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.