MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3524 · 46 genes shown · anchor PE_PGRS23 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3524 (family_assigned) — NHL repeat-containing protein Rv3524 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB qcrC (requalified) — cytochrome c qcrC ltp3 (family_assigned) — thiolase domain-containing protein ltp3 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 Rv3521 (family_assigned) — hypothetical protein Rv3521 PPE16 (family_assigned) — PPE family protein PPE16 PPE16 PPE64 (family_assigned) — PPE family protein PPE64 PPE64 PPE12 (family_assigned) — PPE family protein PPE12 PPE12 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE40 (family_assigned) — PPE family protein PPE40 PPE40 PPE24 (family_assigned) — PPE family protein PPE24 PPE24 PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA pks13 (requalified) — polyketide synthase Pks13 pks13 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtE (requalified) — peptide synthetase mbtE mbtC (requalified) — polyketide synthetase MbtC mbtC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE fadB (requalified) — fatty oxidation protein FadB fadB fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE21 (family_assigned) — PPE family protein PPE21 PPE21 ltp2 (requalified) — lipid-transfer protein ltp2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.