MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3523 · 46 genes shown · anchor ltp4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fadB (requalified) — fatty oxidation protein FadB fadB Rv3521 (family_assigned) — hypothetical protein Rv3521 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c ltp1 (requalified) — lipid-transfer protein ltp1 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 glcB (requalified) — malate synthase G glcB leuA (requalified) — 2-isopropylmalate synthase leuA scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp2 (requalified) — lipid-transfer protein ltp2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1716 (family_assigned) — hypothetical protein Rv1716 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 icl1 (requalified) — isocitrate lyase icl1 aceAa (requalified) — isocitrate lyase AceAa aceAa aceAb (requalified) — isocitrate lyase AceAb aceAb pta (requalified) — phosphate acetyltransferase pta

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.