MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3521 · 43 genes shown · anchor ltp4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3521 (family_assigned) — hypothetical protein Rv3521 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ltp2 (requalified) — lipid-transfer protein ltp2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadB (requalified) — fatty oxidation protein FadB fadB echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 cyp125 (requalified) — steroid C26-monooxygenase cyp125 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv3072c (family_assigned) — hypothetical protein Rv3072c Rv3178 (requalified) — nitroreductase Rv3178 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3527 (family_assigned) — hypothetical protein Rv3527 kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv3531c (family_assigned) — hypothetical protein Rv3531c hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.