MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3520c · 35 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv3521 (family_assigned) — hypothetical protein Rv3521 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv3178 (requalified) — nitroreductase Rv3178 Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA Rv1558 (requalified) — F420H(2)-dependent quinone reductase Rv1558 Rv1855c (requalified) — LLM class F420-dependent oxidoreductase Rv1855c fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 Rv3072c (family_assigned) — hypothetical protein Rv3072c ltp2 (requalified) — lipid-transfer protein ltp2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 fadB (requalified) — fatty oxidation protein FadB fadB chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c Rv1262c (family_assigned) — HIT family protein Rv1262c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC mmpL6 (requalified) — transmembrane transport protein MmpL6 mmpL6 ilvA (requalified) — threonine ammonia-lyase ilvA Rv1856c (family_assigned) — SDR family oxidoreductase Rv1856c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.