MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3517 · 46 genes shown · anchor echA19 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3517 (family_assigned) — hypothetical protein Rv3517 echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 gltB (family_assigned) — glutamate synthase large subunit gltB Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv0393 (family_assigned) — hypothetical protein Rv0393 Rv0767c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0767c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv3668c (requalified) — protease Rv3668c Rv0515 (family_assigned) — hypothetical protein Rv0515 fadD19 (requalified) — acyl-CoA synthetase fadD19 Rv0336 (family_assigned) — hypothetical protein Rv0336 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv3074 (family_assigned) — DUF222 domain-containing protein Rv3074 Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv1148c (family_assigned) — hypothetical protein Rv1148c Rv1378c (family_assigned) — hypothetical protein Rv1378c Rv1702c (requalified) — HNH endonuclease signature motif containing protei Rv1702c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv3467 (family_assigned) — hypothetical protein Rv3467 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0762c (family_assigned) — nuclear transport factor 2 family protein Rv0762c Rv0763c (requalified) — ferredoxin Rv0763c cyp123 (requalified) — cytochrome P450 cyp123 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.