MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3512 · 41 genes shown · anchor PE_PGRS55 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS56 (family_assigned) — PE-PGRS family protein PE_PGRS56 PE_PGRS56 PE_PGRS55 (family_assigned) — PE-PGRS family protein PE_PGRS55 PE_PGRS55 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49 PE27A (family_assigned) — PE family protein PE27A PE27A PE_PGRS53 (family_assigned) — PE-PGRS family protein PE_PGRS53 PE_PGRS53 PE_PGRS57 (family_assigned) — PE-PGRS family protein PE_PGRS57 PE_PGRS57 Rv2813 (family_assigned) — ExeA family protein Rv2813 PE_PGRS13 (family_assigned) — PE-PGRS family protein PE_PGRS13 PE_PGRS13 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB Rv3538 (requalified) — dehydrogenase Rv3538 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 PE_PGRS61 (family_assigned) — PE-PGRS family-related protein PE_PGRS61 PE_PGRS61 PE9 (family_assigned) — PE family protein PE9 PE9 Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A PE_PGRS50 (family_assigned) — PE-PGRS family protein PE_PGRS50 PE_PGRS50 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PE_PGRS21 (family_assigned) — PE-PGRS family protein PE_PGRS21 PE_PGRS21 PE_PGRS19 (family_assigned) — PE-PGRS family protein PE_PGRS19 PE_PGRS19 PPE58 (family_assigned) — PPE family protein PPE58 PPE58 PE26 (family_assigned) — PE family protein PE26 PE26 PPE46 (family_assigned) — PPE family protein PPE46 PPE46 esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ esxS (requalified) — ESAT-6 like protein EsxS esxS fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 PE_PGRS54 (family_assigned) — PE-PGRS family protein PE_PGRS54 PE_PGRS54 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv1523 (requalified) — class I SAM-dependent methyltransferase Rv1523 PPE9 (family_assigned) — PPE family protein PPE9 PPE9 Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv2811 (family_assigned) — hypothetical protein Rv2811 gltB (family_assigned) — glutamate synthase large subunit gltB PE_PGRS12 (family_assigned) — PE-PGRS family protein PE_PGRS12 PE_PGRS12 Rv3412 (dark) — DUF5319 domain-containing protein Rv3412 arfC (family_assigned) — hypothetical protein arfC vapC2 (family_assigned) — PIN domain nuclease vapC2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.