MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3508 · 44 genes shown · anchor PE_PGRS53 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS54 (family_assigned) — PE-PGRS family protein PE_PGRS54 PE_PGRS54 PE_PGRS53 (family_assigned) — PE-PGRS family protein PE_PGRS53 PE_PGRS53 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv3213c (family_assigned) — AAA family ATPase Rv3213c aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB Rv2813 (family_assigned) — ExeA family protein Rv2813 Rv3212 (family_assigned) — hypothetical protein Rv3212 PPE9 (family_assigned) — PPE family protein PPE9 PPE9 Rv3538 (requalified) — dehydrogenase Rv3538 fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 PE_PGRS56 (family_assigned) — PE-PGRS family protein PE_PGRS56 PE_PGRS56 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB entC (requalified) — isochorismate synthase entC gpm2 (requalified) — phosphoglycerate mutase gpm2 Rv2647 (requalified) — hypothetical protein Rv2647 ftsK (requalified) — DNA translocase FtsK ftsK dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c pheA (requalified) — prephenate dehydratase pheA Rv2812 (family_assigned) — helix-turn-helix domain-containing protein Rv2812 Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv2811 (family_assigned) — hypothetical protein Rv2811 gltB (family_assigned) — glutamate synthase large subunit gltB rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv0387c (family_assigned) — Conserved hypothetical protein Rv0387c purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ Rv1146 (requalified) — transmembrane transport protein Rv1146

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.