MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3507 · 25 genes shown · anchor fadD17 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS53 (family_assigned) — PE-PGRS family protein PE_PGRS53 PE_PGRS53 fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 PE_PGRS54 (family_assigned) — PE-PGRS family protein PE_PGRS54 PE_PGRS54 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 PE_PGRS56 (family_assigned) — PE-PGRS family protein PE_PGRS56 PE_PGRS56 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv3213c (family_assigned) — AAA family ATPase Rv3213c aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB Rv2813 (family_assigned) — ExeA family protein Rv2813 Rv3212 (family_assigned) — hypothetical protein Rv3212 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 PE_PGRS55 (family_assigned) — PE-PGRS family protein PE_PGRS55 PE_PGRS55 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.