MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3506 · 46 genes shown · anchor fadE26 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 menE (requalified) — o-succinylbenzoate--CoA ligase menE rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 fadD1 (requalified) — fatty-acid--CoA ligase FadD1 fadD1 Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fas (requalified) — fatty acid synthase fas Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c pks15 (requalified) — polyketide synthase pks15 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks1 (requalified) — polyketide synthase pks1 ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB menC (requalified) — o-succinylbenzoate synthase menC Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c pitA (requalified) — anion permease pitA engA (requalified) — ribosome biogenesis GTPase Der engA rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA1 (requalified) — acyltransferase PapA1 papA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.