MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3502c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fas (requalified) — fatty acid synthase fas Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c fdxD (requalified) — ferredoxin fdxD Rv1050 (family_assigned) — SDR family oxidoreductase Rv1050 Rv3492c (requalified) — Mce associated protein Rv3492c kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv3531c (family_assigned) — hypothetical protein Rv3531c Rv1865c (family_assigned) — SDR family oxidoreductase Rv1865c Rv0945 (requalified) — oxidoreductase Rv0945 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c rsfB (family_assigned) — STAS domain-containing protein rsfB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.