MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3493c · 31 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3493c (requalified) — mammalian cell entry protein Rv3493c Rv3492c (requalified) — Mce associated protein Rv3492c mce4D (family_assigned) — virulence factor Mce family protein mce4D mce4F (family_assigned) — virulence factor Mce family protein mce4F mce4C (family_assigned) — virulence factor Mce family protein mce4C lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4B (family_assigned) — virulence factor Mce family protein mce4B mce4A (family_assigned) — Mce family protein Mce4A mce4A yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE4A (family_assigned) — ABC transporter permease yrbE4A atsB (requalified) — arylsulfatase AtsB atsB Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv2600 (family_assigned) — integral membrane protein Rv2600 mkl (family_assigned) — ABC transporter ATP-binding protein mkl Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 lpqC (family_assigned) — PHB depolymerase family esterase lpqC glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fas (requalified) — fatty acid synthase fas Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c speE (requalified) — spermidine synthase speE Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2599 (family_assigned) — DUF4247 domain-containing protein Rv2599 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.