MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3491 · 46 genes shown · anchor otsA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3491 (family_assigned) — hypothetical protein Rv3491 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 otsA (requalified) — trehalose-6-phosphate synthase otsA Rv3489 (family_assigned) — hypothetical protein Rv3489 Rv1954A (dark) — Hypothetical protein Rv1954A Rv2771c (family_assigned) — flavodoxin family protein Rv2771c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 spmT (requalified) — sphingomyelinase spmT rpfC (requalified) — resuscitation-promoting factor RpfC rpfC tkt (requalified) — transketolase tkt Rv0925c (family_assigned) — flavodoxin family protein Rv0925c rpfE (requalified) — resuscitation-promoting factor protein RpfE rpfE treS (requalified) — maltose alpha-D-glucosyltransferase treS treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2004c (family_assigned) — AAA family ATPase Rv2004c Rv2402 (requalified) — trehalase Rv2402 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU Rv3032 (requalified) — glycogen synthase Rv3032 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv2779c (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2779c Rv1220c (requalified) — methyltransferase Rv1220c raaS (family_assigned) — transcriptional regulator RaaS raaS rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD rpfA (requalified) — resuscitation-promoting factor protein RpfA rpfA Rv1861 (family_assigned) — GlsB/YeaQ/YmgE family stress response membrane pro Rv1861 higB (requalified) — type II toxin-antitoxin system toxin HigB higB Rv2772c (family_assigned) — hypothetical protein Rv2772c dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB Rv2774c (dark) — hypothetical protein Rv2774c PPE44 (family_assigned) — PPE family protein PPE44 PPE44 gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv3909 (dark) — hypothetical protein Rv3909 Rv2164c (family_assigned) — hypothetical protein Rv2164c ptrp (family_assigned) — hypothetical protein ptrp ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD Rv0312 (family_assigned) — Hsp70 family protein Rv0312 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c csd (requalified) — cysteine desulfurase csd Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c Rv1883c (family_assigned) — SRPBCC family protein Rv1883c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.