MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3489 · 46 genes shown · anchor otsA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3489 (family_assigned) — hypothetical protein Rv3489 otsA (requalified) — trehalose-6-phosphate synthase otsA Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv3491 (family_assigned) — hypothetical protein Rv3491 Rv2779c (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2779c Rv1220c (requalified) — methyltransferase Rv1220c raaS (family_assigned) — transcriptional regulator RaaS raaS drrC (family_assigned) — ABC transporter permease drrC Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c otsB2 (requalified) — trehalose-phosphatase otsB2 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU Rv3032 (requalified) — glycogen synthase Rv3032 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC Rv3840 (family_assigned) — transcriptional regulator Rv3840 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1954A (dark) — Hypothetical protein Rv1954A Rv2771c (family_assigned) — flavodoxin family protein Rv2771c Rv2778c (family_assigned) — SRPBCC family protein Rv2778c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 ald (requalified) — alanine dehydrogenase ald Rv2777c (requalified) — metal-dependent hydrolase Rv2777c kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 gltB (family_assigned) — glutamate synthase large subunit gltB Rv1703c (requalified) — O-methyltransferase Rv1703c sigE (requalified) — RNA polymerase sigma factor SigE sigE mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c Rv2175c (family_assigned) — DNA-binding protein Rv2175c Rv0744c (family_assigned) — helix-turn-helix domain-containing protein Rv0744c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.