MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3487c · 46 genes shown · anchor lipY · open gene page → · ← back to 1 hop

Evidence: Min score 0
lipF (requalified) — carboxylesterase LipF lipF lipY (requalified) — triacylglycerol lipase Lip lipY rpmD (requalified) — 50S ribosomal protein L30 rpmD lepB (requalified) — signal peptidase I lepB Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE lipC (requalified) — esterase LipC lipC qcrA (requalified) — hypothetical protein qcrA pks1 (requalified) — polyketide synthase pks1 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 tgs4 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs4 Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsS (requalified) — 30S ribosomal protein S19 rpsS rnhB (requalified) — ribonuclease HII rnhB rplS (requalified) — 50S ribosomal protein L19 rplS Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE ligD (requalified) — ATP-dependent DNA ligase ligD nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 lipW (family_assigned) — alpha/beta hydrolase lipW Rv0221 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv0221 Rv0219 (dark) — hypothetical protein Rv0219 echA1 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA1 qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.