MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3486 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3486 (family_assigned) — DoxX family protein Rv3486 eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c ctpE (requalified) — cation-translocating P-type ATPase ctpE ctpF (requalified) — cation-transporting P-type ATPase ctpF ctpI (requalified) — cation-transporter ATPase I ctpI ctpH (requalified) — cation-translocating P-type ATPase ctpH atpE (family_assigned) — F0F1 ATP synthase subunit C atpE secY (family_assigned) — preprotein translocase subunit SecY secY eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 glpK (requalified) — glycerol kinase GlpK glpK mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espH (requalified) — type VII secretion system ESX-1 associated protein espH espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espF (requalified) — type VII secretion system ESX-1 associated protein espF eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PE5 (family_assigned) — PE family protein PE5 PE5 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 fas (requalified) — fatty acid synthase fas Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0906 (requalified) — MBL fold metallo-hydrolase Rv0906 echA6 (requalified) — enoyl-CoA hydratase echA6 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv0909 (requalified) — antitoxin Rv0909 Rv2625c (family_assigned) — site-2 protease family protein Rv2625c pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB Rv2028c (requalified) — universal stress protein Rv2028c Rv2624c (requalified) — universal stress protein Rv2624c Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.