MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3485c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c fas (requalified) — fatty acid synthase fas Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0945 (requalified) — oxidoreductase Rv0945 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv3486 (family_assigned) — DoxX family protein Rv3486 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ tpx (requalified) — thiol peroxidase tpx Rv2132 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv2132 Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv0544c (family_assigned) — hypothetical protein Rv0544c pitA (requalified) — anion permease pitA Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv1883c (family_assigned) — SRPBCC family protein Rv1883c cyp140 (requalified) — cytochrome P450 cyp140 lppE (requalified) — lipoprotein LpqH lppE Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv2766c (requalified) — short-chain type dehydrogenase/reductase Rv2766c echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 Rv0943c (dark) — hypothetical protein Rv0943c Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.