MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3484 · 46 genes shown · anchor rsdA · open gene page → · ← back to 1 hop

Evidence: Min score 0
cpsA (family_assigned) — LCP family protein cpsA Rv3896c (requalified) — transglycosylase Rv3896c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3483c (family_assigned) — LppP/LprE family lipoprotein Rv3483c Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv3482c (dark) — DUF2510 domain-containing protein Rv3482c Rv1006 (family_assigned) — hypothetical protein Rv1006 ephD (family_assigned) — SDR family oxidoreductase ephD Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1682 (family_assigned) — hypothetical protein Rv1682 Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c Rv3718c (family_assigned) — SRPBCC family protein Rv3718c Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 PE_PGRS12 (family_assigned) — PE-PGRS family protein PE_PGRS12 PE_PGRS12 Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv2963 (requalified) — permease Rv2963 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv0089 (requalified) — methyltransferase Rv0089 Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 Rv3481c (family_assigned) — GAP family protein Rv3481c hsr1 (requalified) — hypothetical protein hsr1 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.