MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3471c · 46 genes shown · anchor ilvB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3471c (family_assigned) — hypothetical protein Rv3471c ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 Rv3472 (family_assigned) — nuclear transport factor 2 family protein Rv3472 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 infB (requalified) — translation initiation factor IF-2 infB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA ilvN (family_assigned) — acetolactate synthase small subunit ilvN ilvC (requalified) — ketol-acid reductoisomerase ilvC leuB (requalified) — 3-isopropylmalate dehydrogenase leuB ilvA (requalified) — threonine ammonia-lyase ilvA ilvB1 (family_assigned) — acetolactate synthase large subunit IlvB ilvB1 ilvG (requalified) — acetolactate synthase ilvG espK (family_assigned) — ESX-1 secretion-associated protein EspK espK iniB (requalified) — isoniazid-induced protein IniB iniB Rv0613c (family_assigned) — SEC-C domain-containing protein Rv0613c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 galE1 (requalified) — UDP-glucose 4-epimerase galE1 glf (requalified) — UDP-galactopyranose mutase glf galE2 (family_assigned) — SDR family oxidoreductase galE2 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG hsaE (requalified) — 2-keto-4-pentenoate hydratase hsaE hsaF (requalified) — 4-hydroxy-2-oxovalerate aldolase hsaF PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv1524 (requalified) — glycosyltransferase Rv1524 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks15 (requalified) — polyketide synthase pks15 entC (requalified) — isochorismate synthase entC Rv0948c (requalified) — chorismate mutase Rv0948c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.