MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3463 · 46 genes shown · anchor rmlB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC trxB1 (requalified) — thioredoxin trxB1 infA (requalified) — translation initiation factor IF-1 infA Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv3368c (family_assigned) — nitroreductase family protein Rv3368c Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 Rv2693c (dark) — DUF3159 domain-containing protein Rv2693c Rv0121c (family_assigned) — TIGR03668 family PPOX class F420-dependent oxidore Rv0121c rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c mshD (requalified) — mycothiol synthase mshD mca (requalified) — mycothiol conjugate amidase Mca mca mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv0338c (requalified) — heterodisulfide reductase-related iron-sulfur bind Rv0338c Rv1510 (family_assigned) — hypothetical protein Rv1510 trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 csd (requalified) — cysteine desulfurase csd trxA (family_assigned) — thioredoxin family protein trxA echA12 (requalified) — enoyl-CoA hydratase echA12 Rv1473 (family_assigned) — macrolide ABC transporter ATP-binding protein Rv1473 rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rplD (requalified) — 50S ribosomal protein L4 rplD rpsC (requalified) — 30S ribosomal protein S3 rpsC Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 dinP (requalified) — DNA polymerase IV dinP Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI Rv1874 (family_assigned) — hypothetical protein Rv1874 lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1873 (family_assigned) — DUF1810 domain-containing protein Rv1873 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv3369 (family_assigned) — hypothetical protein Rv3369 Rv0274 (family_assigned) — VOC family protein Rv0274

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.