MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3457c · 44 genes shown · anchor sigA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsC (requalified) — 30S ribosomal protein S3 rpsC rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL helZ (requalified) — DEAD/DEAH box helicase helZ sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB rplO (requalified) — 50S ribosomal protein L15 rplO rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rplV (requalified) — 50S ribosomal protein L22 rplV rpsI (requalified) — 30S ribosomal protein S9 rpsI rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rplF (requalified) — 50S ribosomal protein L6 rplF rplM (requalified) — 50S ribosomal protein L13 rplM rplD (requalified) — 50S ribosomal protein L4 rplD rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rpsO (requalified) — 30S ribosomal protein S15 rpsO rplE (requalified) — 50S ribosomal protein L5 rplE rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplX (requalified) — 50S ribosomal protein L24 rplX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.