MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3455c · 46 genes shown · anchor rpoA · open gene page → · ← back to 1 hop

Evidence: Min score 0
truA (requalified) — tRNA pseudouridine synthase A truA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsM (requalified) — 30S ribosomal protein S13 rpsM truB (requalified) — tRNA pseudouridine(55) synthase TruB truB infA (requalified) — translation initiation factor IF-1 infA Rv2367c (requalified) — endoribonuclease Rv2367c Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpmD (requalified) — 50S ribosomal protein L30 rpmD trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpsH (requalified) — 30S ribosomal protein S8 rpsH rplO (requalified) — 50S ribosomal protein L15 rplO rplV (requalified) — 50S ribosomal protein L22 rplV rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplD (requalified) — 50S ribosomal protein L4 rplD rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplT (requalified) — 50S ribosomal protein L20 rplT guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA infB (requalified) — translation initiation factor IF-2 infB pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv2795c (requalified) — metallophosphoesterase Rv2795c rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rpsL (requalified) — 30S ribosomal protein S12 rpsL phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2365c (requalified) — cytidine deaminase Rv2365c era (requalified) — GTPase Era era sodA (requalified) — superoxide dismutase sodA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.