MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3435c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3899c (family_assigned) — hypothetical protein Rv3899c PE_PGRS42 (family_assigned) — PE-PGRS family protein PE_PGRS42 PE_PGRS42 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c gadB (requalified) — glutamate decarboxylase gadB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3162c (family_assigned) — integral membrane protein Rv3162c glpQ1 (requalified) — glycerophosphodiester phosphodiesterase glpQ1 Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 blaC (requalified) — beta-lactamase blaC eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv1060 (family_assigned) — SRPBCC family protein Rv1060 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.