MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3434c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c gadB (requalified) — glutamate decarboxylase gadB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv2729c (family_assigned) — DMT family transporter Rv2729c Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv2963 (requalified) — permease Rv2963 Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c gltB (family_assigned) — glutamate synthase large subunit gltB mrsA (requalified) — phosphoglucosamine mutase mrsA glnA2 (family_assigned) — glutamine synthetase family protein glnA2 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 Rv0181c (family_assigned) — pirin family protein Rv0181c Rv1006 (family_assigned) — hypothetical protein Rv1006 hsr1 (requalified) — hypothetical protein hsr1 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.