MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3427c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv3428c (requalified) — transposase Rv3428c dnaB (requalified) — replicative DNA helicase dnaB Rv2943 (requalified) — insertion sequence element IS1533 transposase Rv2943 Rv2943A (requalified) — transposase Rv2943A Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv3193c (family_assigned) — UPF0182 family protein Rv3193c Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 dnaG (requalified) — DNA primase dnaG Rv0057 (dark) — hypothetical protein Rv0057 darT (requalified) — toxin-antitoxin system toxin DarT darT ssb (family_assigned) — single-stranded DNA-binding protein ssb rplI (requalified) — 50S ribosomal protein L9 rplI cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 Rv2424c (requalified) — transposase Rv2424c Rv2177c (requalified) — transposase Rv2177c Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 Rv1996 (requalified) — universal stress protein Rv1996 Rv3134c (requalified) — universal stress protein Rv3134c Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 tgs1 (requalified) — diacylglycerol O-acyltransferase tgs1 Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI Rv3047c (dark) — hypothetical protein Rv3047c nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 tmk (requalified) — dTMP kinase tmk Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 Rv3196 (family_assigned) — hypothetical protein Rv3196 lprN (family_assigned) — Mce family lipoprotein LprN lprN trpG (requalified) — anthranilate synthase component II trpG ppk2 (requalified) — polyphosphate kinase ppk2 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv3230c (requalified) — NADPH oxidoreductase Rv3230c Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.