MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3425 · 46 genes shown · anchor PPE58 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE57 (family_assigned) — PPE family protein PPE57 PPE57 PPE58 (family_assigned) — PPE family protein PPE58 PPE58 Rv3424c (dark) — hypothetical protein Rv3424c esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxA (requalified) — ESAT-6 protein EsxA esxA PPE39 (family_assigned) — PPE family protein PPE39 PPE39 Rv1255c (family_assigned) — helix-turn-helix domain-containing protein Rv1255c Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c PPE69 (family_assigned) — PPE family protein PPE69 PPE69 Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c PE35 (family_assigned) — PE family protein PE35 PE35 PPE59 (family_assigned) — PPE family protein PPE59 PPE59 PPE53 (family_assigned) — PPE family protein PPE53 PPE53 PPE66 (family_assigned) — PPE family protein PPE66 PPE66 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI alr (requalified) — alanine racemase alr tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxW (requalified) — type VII secretion system protein EsxW esxW eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxO (requalified) — type VII secretion system effector EsxO esxO PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 espE (requalified) — type VII secretion system ESX-1 associated protein espE cyp130 (requalified) — cytochrome P450 Cyp130 cyp130 Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv1258c (requalified) — MFS transporter Rv1258c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.