MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3423c · 46 genes shown · anchor tsaE · open gene page → · ← back to 1 hop

Evidence: Min score 0
alr (requalified) — alanine racemase alr tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ald (requalified) — alanine dehydrogenase ald murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD gadB (requalified) — glutamate decarboxylase gadB murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD ftsW (family_assigned) — putative lipid II flippase FtsW ftsW pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB Rv2779c (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2779c Rv2778c (family_assigned) — SRPBCC family protein Rv2778c Rv1188 (requalified) — proline dehydrogenase Rv1188 murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA groES (requalified) — chaperonin GroES groES pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ ilvE (requalified) — branched-chain amino acid aminotransferase ilvE gdh (requalified) — NAD-glutamate dehydrogenase gdh Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.