MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3422c · 46 genes shown · anchor alr · open gene page → · ← back to 1 hop

Evidence: Min score 0
tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB alr (requalified) — alanine racemase alr gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c gadB (requalified) — glutamate decarboxylase gadB pta (requalified) — phosphate acetyltransferase pta Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 groES (requalified) — chaperonin GroES groES Rv2367c (requalified) — endoribonuclease Rv2367c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ald (requalified) — alanine dehydrogenase ald murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c ackA (requalified) — acetate kinase ackA glcB (requalified) — malate synthase G glcB Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC acs (requalified) — acetate--CoA ligase acs Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK prfA (requalified) — peptide chain release factor 1 prfA rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe rpmE (requalified) — 50S ribosomal protein L31 rpmE rho (requalified) — transcription termination factor Rho rho atpB (family_assigned) — F0F1 ATP synthase subunit A atpB groEL1 (requalified) — chaperonin GroEL groEL1 groEL2 (requalified) — chaperonin GroEL groEL2 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaK (requalified) — molecular chaperone DnaK dnaK htpG (requalified) — molecular chaperone HtpG htpG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.