MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3419c · 46 genes shown · anchor tsaE · open gene page → · ← back to 1 hop

Evidence: Min score 0
gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI alr (requalified) — alanine racemase alr groES (requalified) — chaperonin GroES groES pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c aroB (requalified) — 3-dehydroquinate synthase aroB birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA gadB (requalified) — glutamate decarboxylase gadB ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ald (requalified) — alanine dehydrogenase ald murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF groEL1 (requalified) — chaperonin GroEL groEL1 groEL2 (requalified) — chaperonin GroEL groEL2 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaK (requalified) — molecular chaperone DnaK dnaK htpG (requalified) — molecular chaperone HtpG htpG clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rplP (requalified) — 50S ribosomal protein L16 rplP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv1647 (requalified) — adenylate cyclase Rv1647 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI thrS (requalified) — threonine--tRNA ligase thrS Rv0987 (family_assigned) — FtsX-like permease family protein Rv0987 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv2563 (family_assigned) — ABC transporter permease Rv2563 Rv0988 (family_assigned) — lipocalin-like domain-containing protein Rv0988 Rv3000 (family_assigned) — ABC transporter permease Rv3000 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 rpfB (requalified) — resuscitation-promoting factor RpfB rpfB ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ Rv2562 (family_assigned) — Conserved hypothetical protein Rv2562 Rv0393 (family_assigned) — hypothetical protein Rv0393

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.