MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3415c · 46 genes shown · anchor rsdA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3415c (family_assigned) — hypothetical protein Rv3415c rsdA (requalified) — anti-sigma D factor RsdA rsdA sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv2693c (dark) — DUF3159 domain-containing protein Rv2693c Rv3031 (family_assigned) — glycoside hydrolase family 57 protein Rv3031 lpqM (requalified) — neutral zinc metallopeptidase lpqM gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP rsfS (requalified) — ribosome silencing factor rsfS nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD Rv2417c (family_assigned) — DegV family protein Rv2417c Rv3038c (family_assigned) — methyltransferase domain-containing protein Rv3038c Rv3034c (requalified) — acetyltransferase Rv3034c Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pyrE (requalified) — orotate phosphoribosyltransferase pyrE pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv0381c (dark) — hypothetical protein Rv0381c ychF (requalified) — redox-regulated ATPase YchF ychF Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv3311 (family_assigned) — primosomal protein Rv3311 cei (requalified) — envelope integrity protein Cei cei Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.