MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3408 · 45 genes shown · anchor vapB47 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapB47 (requalified) — antitoxin VapB47 vapB47 vapB46 (requalified) — antitoxin VapB46 vapB46 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 Rv3405c (family_assigned) — helix-turn-helix domain-containing protein Rv3405c mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv3386 (requalified) — transposase Rv3386 Rv3479 (requalified) — transmembrane protein Rv3479 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 aldC (requalified) — aldehyde dehydrogenase AldC aldC vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapB12 (requalified) — antitoxin vapB12 mazE9 (requalified) — antitoxin MazE9 mazE9 cobB (requalified) — NAD-dependent protein deacylase cobB Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 mazE3 (requalified) — antitoxin MazE3 mazE3 mazE6 (requalified) — antitoxin MazE6 mazE6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 vapB9 (requalified) — antitoxin VapB9 vapB9 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.