MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3407 · 44 genes shown · anchor vapC47 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB47 (requalified) — antitoxin VapB47 vapB47 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv3098A (family_assigned) — PemK-like protein Rv3098A Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapB46 (requalified) — antitoxin VapB46 vapB46 Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapB35 (requalified) — antitoxin VapB35 vapB35 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 Rv3405c (family_assigned) — helix-turn-helix domain-containing protein Rv3405c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 aldC (requalified) — aldehyde dehydrogenase AldC aldC vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD vapB1 (requalified) — antitoxin VapB1 vapB1 Rv0064 (family_assigned) — UPF0182 family protein Rv0064 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3386 (requalified) — transposase Rv3386 ptrp (family_assigned) — hypothetical protein ptrp embR (requalified) — response regulator transcription factor EmbR embR Rv2113 (family_assigned) — integral membrane protein Rv2113 Rv3254 (requalified) — oxidoreductase Rv3254 Rv1775 (family_assigned) — hypothetical protein Rv1775 vapB9 (requalified) — antitoxin VapB9 vapB9 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 mazE3 (requalified) — antitoxin MazE3 mazE3 mazE6 (requalified) — antitoxin MazE6 mazE6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.