MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3401 · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv3400 (family_assigned) — beta-phosphoglucomutase family hydrolase Rv3400 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv2402 (requalified) — trehalase Rv2402 fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 cysE (requalified) — serine O-acetyltransferase cysE idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2004c (family_assigned) — AAA family ATPase Rv2004c otsA (requalified) — trehalose-6-phosphate synthase otsA treY (requalified) — maltooligosyl trehalose synthase treY treX (requalified) — maltooligosyl trehalose synthase treX mak (requalified) — maltokinase mak Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 moeX (requalified) — radical SAM protein moeX Rv1678 (family_assigned) — hypothetical protein Rv1678 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadB (requalified) — fatty oxidation protein FadB fadB guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 cbs (requalified) — cystathionine beta-synthase cbs sdaA (requalified) — L-serine ammonia-lyase sdaA cysS1 (requalified) — cysteine--tRNA ligase cysS1 serB2 (requalified) — phosphoserine phosphatase SerB serB2 Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsB (family_assigned) — polyprenyl synthetase family protein idsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.