MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3400 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3400 (family_assigned) — beta-phosphoglucomutase family hydrolase Rv3400 Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 phyA (requalified) — presqualene diphosphate synthase HpnD phyA otsB2 (requalified) — trehalose-phosphatase otsB2 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 Rv3405c (family_assigned) — helix-turn-helix domain-containing protein Rv3405c mpt64 (requalified) — immunoprotective protein Mpt64 mpt64 cfp21 (requalified) — cutinase Cfp21 cfp21 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv2402 (requalified) — trehalase Rv2402 guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 Rv2004c (family_assigned) — AAA family ATPase Rv2004c Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsB (family_assigned) — polyprenyl synthetase family protein idsB otsA (requalified) — trehalose-6-phosphate synthase otsA vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapB47 (requalified) — antitoxin VapB47 vapB47 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 aldC (requalified) — aldehyde dehydrogenase AldC aldC cobB (requalified) — NAD-dependent protein deacylase cobB Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1979c (family_assigned) — APC family permease Rv1979c nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA pstS1 (family_assigned) — phosphate ABC transporter substrate-binding lipopr pstS1 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv1592c (family_assigned) — lipase family protein Rv1592c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.