MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3399 · 46 genes shown · anchor phyA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 phyA (requalified) — presqualene diphosphate synthase HpnD phyA idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 Rv3400 (family_assigned) — beta-phosphoglucomutase family hydrolase Rv3400 Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 pptT (requalified) — 4'-phosphopantetheinyl transferase pptT pntAa (family_assigned) — Re/Si-specific NAD(P)(+) transhydrogenase subunit pntAa idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv2402 (requalified) — trehalase Rv2402 guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK Rv0398c (family_assigned) — hypothetical protein Rv0398c Rv0360c (family_assigned) — hypothetical protein Rv0360c qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ltp1 (requalified) — lipid-transfer protein ltp1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 Rv2795c (requalified) — metallophosphoesterase Rv2795c truB (requalified) — tRNA pseudouridine(55) synthase TruB truB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks13 (requalified) — polyketide synthase Pks13 pks13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB pntAb (family_assigned) — NAD(P) transhydrogenase subunit alpha pntAb cobB (requalified) — NAD-dependent protein deacylase cobB nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD ppnK (requalified) — NAD kinase ppnK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.