MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3395c · 46 genes shown · anchor dnaE2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3395c (family_assigned) — hypothetical protein Rv3395c Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 dinX (requalified) — DNA polymerase IV dinX dinP (requalified) — DNA polymerase IV dinP Rv3395A (family_assigned) — membrane protein Rv3395A guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 Rv3196 (family_assigned) — hypothetical protein Rv3196 recN (requalified) — DNA repair protein RecN recN dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA polA (requalified) — DNA polymerase I polA Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c lexA (requalified) — transcriptional repressor LexA lexA Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c pafC (family_assigned) — YafY family protein pafC guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK Rv0514 (dark) — hypothetical protein Rv0514 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c Rv1188 (requalified) — proline dehydrogenase Rv1188 Rv1171 (family_assigned) — hypothetical protein Rv1171

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.