MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3390 · 46 genes shown · anchor acrA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqD (family_assigned) — histidine phosphatase family protein lpqD acrA1 (family_assigned) — SDR family oxidoreductase acrA1 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c cobQ1 (requalified) — cobyric acid synthase cobQ1 Rv3256c (requalified) — TobH protein Rv3256c Rv0358 (requalified) — peptidase M50 Rv0358 purA (requalified) — adenylosuccinate synthase purA fadE22 (requalified) — acyl-CoA dehydrogenase fadE22 fadE3 (family_assigned) — Probable acyl-CoA dehydrogenase FadE3 fadE3 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM cobH (requalified) — precorrin-8X methylmutase cobH cobK (requalified) — cobalt-precorrin-6A reductase cobK cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobG (requalified) — precorrin-3B synthase cobG proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV Rv1234 (requalified) — general stress protein Rv1234 proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ mdh (requalified) — malate dehydrogenase mdh Rv0366c (family_assigned) — zeta toxin family protein Rv0366c Rv0369c (requalified) — membrane oxidoreductase Rv0369c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB mptA (requalified) — alpha-(1->6)-mannopyranosyltransferase A mptA Rv0370c (family_assigned) — MoxR family ATPase Rv0370c cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU cobD (requalified) — cobalamin biosynthesis protein cobD cobO (requalified) — cob(I)alamin adenosyltransferase cobO cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.