MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3389c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv0687 (family_assigned) — Rv0687 family mycofactocin-dependent SDR oxidoredu Rv0687 ltp1 (requalified) — lipid-transfer protein ltp1 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 lpqD (family_assigned) — histidine phosphatase family protein lpqD icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 Rv3538 (requalified) — dehydrogenase Rv3538 Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 fas (requalified) — fatty acid synthase fas Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 Rv0686 (family_assigned) — SHOCT domain-containing protein Rv0686 tuf (requalified) — elongation factor Tu tuf fadB (requalified) — fatty oxidation protein FadB fadB fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp2 (requalified) — lipid-transfer protein ltp2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 acrA1 (family_assigned) — SDR family oxidoreductase acrA1 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.