MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3388 · 30 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS52 (family_assigned) — PE-PGRS family protein PE_PGRS52 PE_PGRS52 Rv3386 (requalified) — transposase Rv3386 Rv3387 (requalified) — transposase Rv3387 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2961 (requalified) — transposase Rv2961 vapB46 (requalified) — antitoxin VapB46 vapB46 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 cobQ1 (requalified) — cobyric acid synthase cobQ1 pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.