MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3385c · 39 genes shown · anchor vapC46 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB46 (requalified) — antitoxin VapB46 vapB46 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv3386 (requalified) — transposase Rv3386 Rv3387 (requalified) — transposase Rv3387 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapB35 (requalified) — antitoxin VapB35 vapB35 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv3479 (requalified) — transmembrane protein Rv3479 Rv2961 (requalified) — transposase Rv2961 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB12 (requalified) — antitoxin vapB12 mazE9 (requalified) — antitoxin MazE9 mazE9

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.