MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3375 · 45 genes shown · anchor gatB · open gene page → · ← back to 1 hop

Evidence: Min score 0
amiD (requalified) — amidase amiD gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 echA18 (requalified) — enoyl-CoA hydratase echA18 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd aldA (requalified) — aldehyde dehydrogenase aldA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aspS (requalified) — aspartate--tRNA ligase aspS gltS (requalified) — glutamate--tRNA ligase gltS gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA amiA2 (requalified) — amidase amiA2 amiB2 (requalified) — amidase amiB2 pta (requalified) — phosphate acetyltransferase pta Rv3175 (requalified) — amidase Rv3175 amiC (requalified) — amidase amiC atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 adhB (requalified) — alcohol dehydrogenase B adhB cyp123 (requalified) — cytochrome P450 cyp123 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA Rv2571c (family_assigned) — aromatic acid exporter family protein Rv2571c hisS (requalified) — histidine--tRNA ligase hisS alaS (requalified) — alanine--tRNA ligase alaS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.