MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3370c · 45 genes shown · anchor otsB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv3395c (family_assigned) — hypothetical protein Rv3395c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX lppK (family_assigned) — hypothetical protein lppK otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv3368c (family_assigned) — nitroreductase family protein Rv3368c recA (requalified) — intein-containing recombinase RecA recA polA (requalified) — DNA polymerase I polA dinX (requalified) — DNA polymerase IV dinX dinP (requalified) — DNA polymerase IV dinP Rv3395A (family_assigned) — membrane protein Rv3395A guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA dnaQ (family_assigned) — DEDDh family exonuclease dnaQ rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c ettA (requalified) — energy-dependent translational throttle protein Et ettA priA (family_assigned) — primosomal protein N' priA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB otsA (requalified) — trehalose-6-phosphate synthase otsA otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv2402 (requalified) — trehalase Rv2402 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv3369 (family_assigned) — hypothetical protein Rv3369 Rv0274 (family_assigned) — VOC family protein Rv0274 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv1375 (family_assigned) — YcaO-like family protein Rv1375

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.