MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3368c · 46 genes shown · anchor dnaE2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3368c (family_assigned) — nitroreductase family protein Rv3368c Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 dnaE2 (requalified) — error-prone DNA polymerase dnaE2 Rv3369 (family_assigned) — hypothetical protein Rv3369 Rv0274 (family_assigned) — VOC family protein Rv0274 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv1375 (family_assigned) — YcaO-like family protein Rv1375 Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv3192 (family_assigned) — hypothetical protein Rv3192 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv1457c (family_assigned) — ABC transporter permease Rv1457c drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC trxB1 (requalified) — thioredoxin trxB1 infA (requalified) — translation initiation factor IF-1 infA Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv3395c (family_assigned) — hypothetical protein Rv3395c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 arcA (requalified) — arginine deiminase arcA Rv1770 (family_assigned) — hypothetical protein Rv1770 pks1 (requalified) — polyketide synthase pks1 Rv3072c (family_assigned) — hypothetical protein Rv3072c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c fadE6 (family_assigned) — acyl-CoA dehydrogenase family protein fadE6 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1376 (family_assigned) — TfuA-like protein Rv1376 Rv1863c (family_assigned) — integral membrane protein Rv1863c Rv1140 (family_assigned) — integral membrane protein Rv1140 Rv0658c (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0658c Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.