MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3359 · 46 genes shown · anchor folD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3359 (requalified) — NADH:flavin oxidoreductase Rv3359 folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD Rv3355c (dark) — DUF3017 domain-containing protein Rv3355c relK (family_assigned) — Txe/YoeB family addiction module toxin relK relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv3169 (family_assigned) — hypothetical protein Rv3169 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv3360 (family_assigned) — FHA domain-containing protein Rv3360 Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3168 (family_assigned) — phosphotransferase family protein Rv3168 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvT (requalified) — aminomethyltransferase gcvT fmt (requalified) — methionyl-tRNA formyltransferase fmt lprD (family_assigned) — hypothetical protein lprD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv0268c (family_assigned) — hypothetical protein Rv0268c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0311 (family_assigned) — hypothetical protein Rv0311 aofH (family_assigned) — flavin monoamine oxidase family protein aofH Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.