MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3350c · 41 genes shown · anchor PE_PGRS36 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv2209 (requalified) — MFS transporter Rv2209 iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 espI (family_assigned) — MinD/ParA family protein espI PPE68 (family_assigned) — PPE family protein PPE68 PPE68 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.