MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3348 · 28 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3348 (requalified) — transposase Rv3348 Rv3844 (requalified) — transposase Rv3844 Rv3349c (requalified) — transposase Rv3349c Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 PE_PGRS50 (family_assigned) — PE-PGRS family protein PE_PGRS50 PE_PGRS50 Rv3845 (family_assigned) — IS110 family transposase Rv3845 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c hsr1 (requalified) — hypothetical protein hsr1 Rv2311 (family_assigned) — hypothetical protein Rv2311 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3035 (family_assigned) — hypothetical protein Rv3035 Rv3802c (requalified) — phospholipase Rv3802c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB lprC (family_assigned) — DUF3558 domain-containing protein lprC vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1146 (requalified) — transmembrane transport protein Rv1146 ripC (requalified) — peptidoglycan hydrolase RipC ripC PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv0759c (family_assigned) — hypothetical protein Rv0759c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.