MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3345c · 45 genes shown · anchor PE_PGRS49 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS50 (family_assigned) — PE-PGRS family protein PE_PGRS50 PE_PGRS50 PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv0759c (family_assigned) — hypothetical protein Rv0759c Rv1288 (requalified) — esterase Rv1288 hsr1 (requalified) — hypothetical protein hsr1 Rv3376 (family_assigned) — HAD family phosphatase Rv3376 Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv3349c (requalified) — transposase Rv3349c betP (family_assigned) — BCCT family transporter betP PE_PGRS21 (family_assigned) — PE-PGRS family protein PE_PGRS21 PE_PGRS21 PE_PGRS19 (family_assigned) — PE-PGRS family protein PE_PGRS19 PE_PGRS19 PPE58 (family_assigned) — PPE family protein PPE58 PPE58 PE26 (family_assigned) — PE family protein PE26 PE26 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2209 (requalified) — MFS transporter Rv2209 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv1727 (family_assigned) — TIGR03086 family metal-binding protein Rv1727 Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cut1 (requalified) — cutinase cut1 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 Rv2750 (family_assigned) — Rv2750 family mycofactocin-dependent SDR oxidoredu Rv2750 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 ftsK (requalified) — DNA translocase FtsK ftsK rseA (requalified) — anti-sigma E factor RseA rseA Rv0793 (family_assigned) — putative quinol monooxygenase Rv0793 Rv1684 (family_assigned) — Trm112 family protein Rv1684 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rhlE (requalified) — DEAD/DEAH box helicase rhlE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.